Viewed 11k times. After installing RTools 3. Only the following incompatible version s of Rtools were found Any thoughts?
Tung Omry Atia Omry Atia 2, 2 2 gold badges 10 10 silver badges 23 23 bronze badges. The second link in particular is very useful! Tung you should make this an answer - it was really helpful! Add a comment. Active Oldest Votes. Community Bot 1 1 1 silver badge. Tung Tung Old answer I had this same problem and it occurs because devtools has not been updated to consider the newest version of RTools 3.
Here is an easy fix that should work while they update the package: add missing RTools 3. Here's how I did it: After installing R 3. Luo Y. Luo 76 4 4 bronze badges. Sign up or log in Sign up using Google. Sign up using Facebook.
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Building intelligent escalation chains for modern SRE. Podcast Who is building clouds for the independent developer? Featured on Meta. Now live: A fully responsive profile. Reducing the weight of our footer. Linked See more linked questions. When a package is found more than once, the warning from find. POSIXt objects can now also be rounded or truncated to month or year. On macOS, unless specified by this environment variable, the maximal vector heap size is set to the maximum of 16GB and the available physical memory.
This is to avoid having the R process killed when macOS over-commits memory. Single components of "POSIXlt" objects can now be extracted and replaced via [ indexing with 2 indices. S3 method lookup now searches the namespace registry after the top level environment of the calling environment. Coercing integer and numeric vectors to character also now uses the ALTREP framework to defer the actual conversion until first use. Finalizers are now run with interrupts suspended. This also eliminates a wrong error message in such cases.
Some as. This is based on new function. These objects can still be serialized in format 2, but less efficiently. Serialization format 3 also records the current native encoding of unflagged strings and converts them when de-serialized in R running under different native encoding. Serialized data in format 3 cannot be read by versions of R prior to version 3. Interrupts can be suspended while evaluating an expression using suspendInterrupts. Subexpression can be evaluated with interrupts enabled using allowInterrupts.
These functions can be used to make sure cleanup handlers cannot be interrupted. The framework is still experimental and may undergo changes in future R releases as more experience is gained. For serial installs this uses the timeout argument of system2 : for parallel installs it requires the timeout utility command from GNU coreutils. C99 functions expm1 , hypot , log1p and nearbyint are now required.
Previously this was not done in a few cases where the default standard passed the tests made e. This requires re-installing packages that use compiled code. The S4 methods on Ops for the "structure" class no longer cause infinite recursion when the structure is not an S4 object. PR Rscript can now accept more than one argument given on the! Previously, one could only pass a single argument on the!
Evaluation of.. Windows mainly. Unicode code points which require surrogate pairs in UTF are now handled. All systems should properly handle surrogate pairs, even those systems that do not need to make use of them.
PR stopifnot e, e2, Extending S4 classes with slots corresponding to special attributes like dim and dimnames now works. Fix for legend when fill has multiple values the first of which is NA all colours used to default to par fg. PR installed. The documentation for installed. PR object. This fixes the citation issue in PR PR ns package splines now also works for a single observation.
Arithmetic with zero-column data frames now works more consistently; issue raised by Bill Dunlap. This e. Reverted unintended change in behavior of return calls in on. Attributes on symbols are now detected and prevented; attempt to add an attribute to a symbol results in an error.
The methods package correctly shows methods when there are multiple methods with the same signature for the same generic still not fully supported, but at least the user can see them. Subassignment with zero length vectors now coerces as documented PR Package parallel. The duplicated method for data frames is now based on the list method instead of string coercion. Consequently unique is better distinguishing data frame rows, fixing PR and PR The methods for matrices and arrays are changed accordingly.
Calling names on an S4 object derived from "environment" behaves by default like calling names on an ordinary environment. This also means that results of computations depending on random number generators will now really be non-reproducible, as documented. Deparsing of consecutive!
As a side effect, this uses fewer parentheses in some other deparsing involving! R version 3. I have problem running phyloseq since updating to the latest version.. Q2: anyone knows how to update R to the version previous to the latest??
I have got version 3. How does I reinstall the packages locally.
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